Does it work for scRNA-seq data?

[levinhein]

Hello. Does this work for scRNA-seq data? What are the changes that can be made to make it working in scRNA-seq data if it is possible?

[WangX-Lab]

Yes, it works. I do not think any changes are needed to use the tool for scRNA-Seq data. 发件人: noreply@github.com <noreply@github.com> 代表 levinhein 发送时间: Monday, October 12, 2020 5:51 PM 收件人: WangX-Lab/PreMSIm <PreMSIm@noreply.github.com> 抄送: Subscribed <subscribed@noreply.github.com> 主题: [WangX-Lab/PreMSIm] Does it work for scRNA-seq data? (#2) Hello. Does this work for scRNA-seq data? What are the changes that can be made to make it working in scRNA-seq data if it is possible? — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#2> , or unsubscribe <https://github.com/notifications/unsubscribe-auth/ANDDKVDPWOORD773GTULDPTSKLGRVANCNFSM4SMSPJKA> .

[levinhein]

Thanks for your prompt reply! Does a scRNA-seq Seurat object (genes=row, cells=column) work as an input data to PreMSIm?

[WangX-Lab]

Yes. On 10/12/2020 18:05, levinhein wrote: Thanks for your prompt reply! Does a scRNA-seq Seurat object (genes=row, cells=column) work as an input data to PreMSIm? —You are receiving this because you commented.Reply to this email directly, view it on GitHub, or unsubscribe. [ { "@context": "http://schema.org", "@type": "EmailMessage", "potentialAction": { "@type": "ViewAction", "target": "#2 (comment)", "url": "#2 (comment)", "name": "View Issue" }, "description": "View this Issue on GitHub", "publisher": { "@type": "Organization", "name": "GitHub", "url": "https://github.com" } } ]

[levinhein]

Thank you so much for confirming! Excited to discover things on my data using PreMSIm!