Segmentation of Speroid Cancer Cells

Getting started

data_utils.py: for most data processing works;

Unet_training.py: builds up the model and trains it;

Unet_evaluation.py: runs tests and visualize the evaluation results in different forms;

cell_analysis.py: for analysis of the segmented masks;

analysis_utils.py: implements extracting various morphological features

Results

Samples from Test set:

• Overlay predicted masks with raw images: