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Welcome to the CNVpytor wiki!
CNVpytor is a Python package and command line tool for CNV/CNA analysis from depth-of-coverage by mapped reads developed in Abyzov Lab, Mayo Clinic.
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Citing CNVpytor
CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing
Milovan Suvakov, Arijit Panda, Colin Diesh, Ian Holmes, Alexej Abyzov, GigaScience, Volume 10, Issue 11, November 2021, giab074
https://doi.org/10.1093/gigascience/giab074
This will install most recent codes
pip install git+https://github.com/abyzovlab/CNVpytor.git
For single user (without admin privileges) use --user parameter
For installing latest release
pip install cnvpytor
cnvpytor -download