Issue 100 #103
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Issue 100 #103
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…if it is installed (and phyloseq if not) in order to use speedyseq for tax_glom()
…rom cran and having it in suggests is causing checks to fail
…::install_github("mikemc/speedyseq")
…ndencies part of R-CMD-check.yaml and test-coverage.yaml
svteichman
requested review from
ailurophilia
and removed request for
paulinetrinh
Codecov Report
@@ Coverage Diff @@
## master #103 +/- ##
===========================================
+ Coverage 52.33% 65.95% +13.62%
===========================================
Files 13 13
Lines 793 796 +3
===========================================
+ Hits 415 525 +110
+ Misses 378 271 -107
Continue to review full report at Codecov.
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ailurophilia
approved these changes
Oct 1, 2021
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Adding speedyseq to suggests, and then adding its URL to Additional_repositories in DESCRIPTION as described here https://cran.r-project.org/web/packages/policies.html. Additionally adding lines in each vignette to load speedyseq instead of phyloseq if it is installed