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1. ROGUE ROGUE Public

   RNAseq & Ontology Graphic User Environment

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2. Homology_Modeling_Project Homology_Modeling_Project Public

   Generate Homology Models of Transcription Factor- DNA structures using a Transcription factor FASTA sequence

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3. New_Electrostatic_Energy_Function New_Electrostatic_Energy_Function Public

   Calculates electrostatic energy between amino acids and nucleic acids in a pdb structure

4. Electrostatic_Energy_Function Electrostatic_Energy_Function Public

   Energy function that calculates the electrostatic energy between amino acids and nucleic acids in a PDB

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5. Integrated_Energy_Function Integrated_Energy_Function Public

   Generates every permutation of a DNA sequence in protein-DNAPDB structure and initiates the energy functions for each permutation

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6. RNA_Seq_Analysis_Shiny_App RNA_Seq_Analysis_Shiny_App Public

   RNAseq differential Expression Analysis tool

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