omegaplus
HPC population genetics code for selective sweep detection
John McCallum from the New Zealand Institute for Plant & Food Research has prepared a nice getting started guide. https://gist.github.com/cfljam/43f1e1d18820a5dfd293c38c646765ac
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OmegaPlus: a scalable tool for rapid detection of selective sweeps in whole-genome datasets
Assembly
C
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chr1runs |
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examples | ||
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.gitignore | ||
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LICENSE |
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Makefile.OPENMP.GENERIC.gcc |
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Makefile.PTHREADS.COARSE.gcc | ||
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Makefile.PTHREADS.FINE.gcc |
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Makefile.PTHREADS.MULTI.gcc |
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Makefile.gcc | ||
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OmegaPlus.c |
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OmegaPlus.h | ||
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OmegaPlus_Manual.pdf |
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OmegaPlus_compression.c | ||
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OmegaPlus_correlation.c | ||
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OmegaPlus_generic.c |
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OmegaPlus_input.c |
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OmegaPlus_omega.c | ||
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README.md |
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README.txt |
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compile_all.sh |
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