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This repository has been archived by the owner on Jun 21, 2023. It is now read-only.
Never a dull moment!
While starting #1753, I noticed that the S7 Zenodo CSVs don't... entirely match up with the panels they are meant to match up with.
Changes that need to be made:
These files are fine:
figure-S7a-data.csv
figure-S7b-data.csv
figure-S7c-data.csv
figure-S7d-data.csv
figure-S7e-data.csv
figure-S7f-data.csv
These files need name swaps to match their correct panels
Note that associated README and tables/copy-zenodo-tables.sh updates are also needed
The current file figure-S7g-data.csv contains the data for panel I.
Never a dull moment!
While starting #1753, I noticed that the S7 Zenodo CSVs don't... entirely match up with the panels they are meant to match up with.
Changes that need to be made:
These files are fine:
figure-S7a-data.csv
figure-S7b-data.csv
figure-S7c-data.csv
figure-S7d-data.csv
figure-S7e-data.csv
figure-S7f-data.csv
These files need name swaps to match their correct panels
figure-S7g-data.csv
contains the data for panel I.figure-S7i-data.csv
in this script: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/20fb1c8f20676db70fd2d44bab51f27332e7e9e8/figures/scripts/figS7-tp53-telomerase-tumor-purity-threshold.Rfigure-S7h-data.csv
contains the data for panel G.figure-S7g-data.csv
in this notebook: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/20fb1c8f20676db70fd2d44bab51f27332e7e9e8/analyses/transcriptomic-dimension-reduction/06-umap-tumor-purity-threshold.Rmdfigure-S7i-data.csv
contains the data for panel H.figure-S7h-data.csv
in this notebook: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/20fb1c8f20676db70fd2d44bab51f27332e7e9e8/analyses/immune-deconv/03-quantiseq-at-threshold.RmdThe text was updated successfully, but these errors were encountered: