Teaching materials and tutorials for the bioinformatics course thought at the University of Tartu.
- Setting up the command-line environment
- Using a pre-configured docker container
- Using Snakemake
- Setting up RStudio for gene expression analysis.
- RNA-seq tutorial from Galaxy
- Introduction to R
- An Introduction to Hierarchical Modeling
- Plotting partial pooling in mixed-effects models
- Statistics for biologists
- Ben Langmead's Algorithms for DNA Sequencing (excellent video lectures on DNA alignment)
- Aaron Quinlan's Applied Computational Genomics Course
- Mike Love's Introduction to Computational Biology
- Bioinformatics Algorithms
- Manolis Kellis's MIT Computational Biology: Genomes, Networks, Evolution, Health
- Rafael A. Irizarry's Introduction to Data Science