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gatk
gatk PublicForked from broadgsa/gatk
GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses
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stormseq
stormseq PublicForked from konradjk/stormseq
STORMSeq: Scalable Tools for Open-source Read Mapping
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statgen
statgen PublicForked from statgen/statgen
This repository has been deprecated and replaced with libStatGen, https://github.com/statgen/libStatGen and the tools have been broken out to other repositories including: https://github.com/statge…
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pindel
pindel PublicForked from genome/pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It u…
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manta
manta PublicForked from Illumina/manta
Structural variant/large-indel caller for Illumina paired-end sequencing reads
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vcf2maf
vcf2maf PublicForked from mskcc/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
Perl 1
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