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pgen as vdjdb score
vdjdb-build-infrastructure
VDJdb aggregation, compilation and proofreading infrastructure development
#395
opened Oct 29, 2024 by
LuppovDaniil
Wrong HLA info for "ASNENMETM" epitope
vdjdb-typos
Minor typos to fix
#394
opened Oct 9, 2024 by
dagfeller
CI/CD
vdjdb-build-infrastructure
VDJdb aggregation, compilation and proofreading infrastructure development
#393
opened Sep 25, 2024 by
LuppovDaniil
PMID:39286976
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#392
opened Sep 23, 2024 by
LuppovDaniil
VDJ genes nomenclature
vdjdb-build-infrastructure
VDJdb aggregation, compilation and proofreading infrastructure development
#389
opened Sep 10, 2024 by
LuppovDaniil
PMID:36778273
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#388
opened Aug 29, 2024 by
LuppovDaniil
PMID:39043656
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#387
opened Aug 29, 2024 by
LuppovDaniil
PMID:38898278
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#385
opened Aug 29, 2024 by
LuppovDaniil
PMID:34811538
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#382
opened Aug 7, 2024 by
LuppovDaniil
PMID:34433824
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#381
opened Aug 1, 2024 by
LuppovDaniil
PMID:39074636
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#380
opened Aug 1, 2024 by
LuppovDaniil
PMID:25157096
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#379
opened Aug 1, 2024 by
LuppovDaniil
PMID:38866784
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#377
opened Jun 15, 2024 by
LuppovDaniil
PMID:38744246
vdj-10x-immudex
scRNA-seq dataset prepared using 10X Genomics kit (or similar) + UMI-tagged MHC-multimers
vdjdb-records-associations
Inferred (directly or indirectly) antigen receptor:condition associations.
#376
opened Jun 9, 2024 by
mikessh
PMID:38762592
vdj-10x
scRNA-seq dataset prepared using 10X Genomics kit (or similar) with TCR/BCR
vdjdb-records-associations
Inferred (directly or indirectly) antigen receptor:condition associations.
#375
opened Jun 9, 2024 by
mikessh
Re-evaluate HLA restriction
vdjdb-build-summary
VDJdb summary report generation infrastructure development
vdjdb-records-formatting&proofreading
Typos and errors that need to be fixed in one or multiple VDJdb records
#372
opened Jun 1, 2024 by
mikessh
Associations from previously published studies, aggregated and listed elsewhere
vdjdb-records-associations
Inferred (directly or indirectly) antigen receptor:condition associations.
vdjdb-records-meta-paper
A paper listing several studies and datasets that can be imported into VDJdb
#371
opened Jun 1, 2024 by
mikessh
PMID:38571941
vdjdb-records-associations
Inferred (directly or indirectly) antigen receptor:condition associations.
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#370
opened Jun 1, 2024 by
mikessh
antigen.gene
/ antigen.species
mix up for some human epitopes
vdjdb-records-formatting&proofreading
#368
opened May 30, 2024 by
JamieHeather
PMID:38508137
vdjdb-records-paper
A published study listing TCRs and cognate antigens with PubMed ID
#367
opened May 30, 2024 by
mikessh
Migrate build from Docker to Podman
vdjdb-build-infrastructure
VDJdb aggregation, compilation and proofreading infrastructure development
vdjdb-maintainance
Critical issues requiring complex maintenance works
#366
opened May 30, 2024 by
mikessh
Structural data update
vdjdb-records-dataset
A dataset of antigen receptors and cognate antigens, e.g. publicly available 10X+Immudex assay data
vdjdb-records-formatting&proofreading
Typos and errors that need to be fixed in one or multiple VDJdb records
#365
opened May 25, 2024 by
mikessh
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