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1. DeePhy DeePhy Public

   A Deep Learning Model to Reconstruct Phylogenetic Tree from Unaligned Nucleotide Sequences

   Python

2. DefIn DefIn Public

   Compute the Deformity Index

   Python

3. GRAFree GRAFree Public

   Python

4. GRAFree2 GRAFree2 Public

   A numerical representation technique of nucleotide sequence

   Python

5. indi_report indi_report Public

   This program generates reports (in PDF) for individual patient from the microbiome signatures

   Jupyter Notebook

6. MetaGP MetaGP Public

   Metagenomic Pipeline for CRC

   Python