This repository contains the lecture and Jupyter notebook for a lecture on UMAP.
Used sources are:
Tutorial: https://umap-learn.readthedocs.io/en/latest/
Paper: https://arxiv.org/abs/1802.03426
scRNA-Seq tutorial in Python: https://github.com/theislab/single-cell-tutorial
blood analysis in Python: https://scanpy-tutorials.readthedocs.io/en/latest/pbmc3k.html
blood analysis in R: https://satijalab.org/seurat/articles/pbmc3k_tutorial.html
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Teaching material for "UMAP for Biologists"
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