NAME

cluster5D – a C program for clustering 5-dimensional PCA data

SYNOPSIS

cluster5D [-v] [-fract ] [PCA filename]

DESCRIPTION

cluster5D is a program that performs 5-dimensional clustering based on PCA data. It is written in the C programming language and is available for Linux, MACOSX and Windows. The program needs only a PCA file with 5 or more columns of numbers with the format described below in order to run and gives the user the opportunity for more specific clustering options.

VERSION

Version 1.3, July 2015

AUTHOR

cluster5D has been developed by Athanasios Baltzis, under the supervision of Prof. Nicholas M. Glykos at the Department of Molecular Biology and Genetics of Democritus University of Thrace, Greece.

LICENCE

Copyright (c) 2014-2015, Athanasios Baltzis

All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.