AttenSyn: An Attention-Based Deep Graph Neural Network for Anticancer Synergistic Drug Combination Prediction

Requirements

Python 3.7.11
Pytorch 1.10.0
numpy 1.20.3
Pytorch Geometric 2.0.4

Data

Download data.pt file from here, and put it into data directory

Run

To run the code:
python main.py

Attention: In our Supporting Information, the experiment under cold start setting follows the same setting as leave-combination-out study of DTSyn.