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@bahlolab

bahlolab

Bahlo laboratory statistical genetics software development

  • Expanded STR algorithm for Illumina sequencing data

    R 9 4 GPL-2.0 Updated Apr 12, 2019
  • Updated Mar 21, 2019
  • Prepare BAM/CRAM for exSTRa R package

    Perl 1 Updated Jan 14, 2019
  • cavalier: Candidate Variant List Evaluation Report

    R 2 Updated Jun 25, 2018
  • R package for inferring multiple infections from high-throughput sequencing data

    R 2 Updated May 17, 2018
  • Performs pairwise identity by descent analysis on haploid recombining organisms in the presence of multiclonal infections using SNP genotype data

    R 2 2 Updated May 16, 2018
  • An R package to perform relatedness mapping between pairs of individuals from SNP data

    C++ 2 Updated Mar 19, 2018
  • Dating Rare Mutations from Small Samples with Dense Marker Data

    R Updated Feb 8, 2018
  • Various scripts

    Perl 1 Updated May 22, 2017
  • Bio::SNP::TOPBOT, Perl module to determine strand of single nucleotide polymorphisms (SNPs) using Illumina's TOP/BOT designation.

    Perl 1 Updated May 17, 2017
  • first repository from tutorial ever

    R Updated Feb 10, 2017
  • A bpipe pipeline for processing WGS from Plasmodium facliparum

    Groovy 2 Updated Nov 21, 2016
  • 📊 Visualise results from genetic linkage analysis software

    R 2 MIT Updated Nov 11, 2016
  • R package for Mendelian variant prioritisation based on in-house MPS pipeline

    R 1 Updated May 11, 2016
  • 🔥 R workshop series for WEHI PHI division

    TeX MIT Updated Mar 30, 2016
  • Documenting usage and experience with bioinformatic tools

    19 3 Updated Sep 11, 2015
  • Object oriented programming in R

    Updated Aug 31, 2015
  • Usage documentation of R packages

    Updated Jul 31, 2015

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