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Popular repositories

  1. NTF2Gen NTF2Gen Public

    NTF2Gen: An enumerative algorithm for generating full-atom models of proteins belonging to the NTF2-like superfamily

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  2. OligoOverlapOpt OligoOverlapOpt Public

    Alternative version of script for overlap optimization from "Multiplex pairwise assembly of array-derived DNA oligonucleotides"

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  3. NTF2analysis NTF2analysis Public

    Scripts for NTF2-like domain structure analysis

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  4. DeNovoCurvedSheetDesign DeNovoCurvedSheetDesign Public

    This repository contains the files necessary to generate most designs in the 2017 paper "Principles for designing proteins with cavities formed by curved beta sheets"

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  5. emtools emtools Public

    Tools for electron microscopy data analysis

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  6. DeltaDihedral DeltaDihedral Public

    Calculate delta dihedrals as in figure 1 of "A genetically encoded, high-signal-to-noise maltose sensor" Marvin et al 2011.

    Jupyter Notebook 1