added extensive analysis and figures for a vignette on CRU vs ClimateNA #376
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| on: | |
| push: | |
| branches: | |
| - main | |
| - devl | |
| pull_request: | |
| branches: | |
| - main | |
| - devl | |
| name: R-CMD-check | |
| jobs: | |
| get_message: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| commitmsg: ${{ steps.getmsg.outputs.msg }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.event.pull_request.head.sha }} | |
| fetch-depth: 0 | |
| - name: Set tags env variables | |
| id: getmsg | |
| run: | | |
| # Get your last commit message, not the merge commit. | |
| msg=$(git log -1 --no-merges --pretty=%s) | |
| echo "msg=$(git log -1 --no-merges --pretty=%s)" >> "$GITHUB_OUTPUT" | |
| echo "commit message: $msg" | |
| R-CMD-check: | |
| needs: get_message | |
| runs-on: ${{ matrix.config.os }} | |
| if: "!contains(needs.get_message.outputs.commitmsg, '[skip-ci]')" | |
| env: | |
| _SP_EVOLUTION_STATUS_: 2 | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| R_REPRODUCIBLE_RUN_ALL_EXAMPLES: true | |
| R_REPRODUCIBLE_RUN_ALL_TESTS: true | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release'} | |
| # - {os: windows-latest, r: 'devel'} | |
| - {os: windows-latest, r: 'release'} | |
| # - {os: windows-latest, r: 'oldrel'} | |
| # - {os: windows-latest, r: '4.1'} | |
| # - {os: ubuntu-20.04, r: 'devel'} | |
| - {os: ubuntu-20.04, r: 'release'} | |
| # - {os: ubuntu-20.04, r: 'oldrel'} | |
| # - {os: ubuntu-20.04, r: '4.1'} | |
| steps: | |
| - name: Check commit message | |
| run: | | |
| echo "${{ needs.get_message.outputs.commitmsg }}" | |
| - name: Install X11 dependencies on MacOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install --cask xquartz | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| Ncpus: 2 | |
| r-version: ${{ matrix.config.r }} | |
| use-public-rspm: false | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| any::plotly | |
| any::rcmdcheck | |
| any::Rcpp | |
| any::remotes | |
| any::stinepack | |
| any::withr | |
| - name: Package checks | |
| if: "contains(needs.get_message.outputs.commitmsg, '[skip-tests]')" | |
| uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| args: 'c("--no-manual", "--as-cran", "--no-tests", "--no-examples")' | |
| - name: Package checks | |
| if: "!contains(needs.get_message.outputs.commitmsg, '[skip-tests]')" | |
| uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| args: 'c("--no-manual", "--as-cran", "--run-dontrun", "--run-donttest")' | |
| - name: Show testthat output | |
| if: always() | |
| run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check |