Fakefish data

[jfsehuanes]

I created a Fakefish module. So far it only has a pulse-fish and a wave-fish. We might want to add more things to it (s.a. different species like Eigenmania), but this should be fine for what we need it now i.e. the TESTS!

please review and add suggestions!

[janscience]

simpler:
for har in range(1, harmonics):
data += ...

[janscience]

Hi Juan,

thank you for starting to implement this!

I put some technical comments into the code...

Once you implemented this we will merge it.

I like the wavefish with the n harmonics. I might make this more general
by supplying relative amplitudes andnphases for each harmonics.
Similar for the pulse fish we might supply amplitudes, relative position
and width (standard deviation) for n gaussian pulses.

And then I will add Apteronotus and Eigenmannia. Likewise we should add
some standard mono- and biphasic pulse fish.

Jan

On 06/30/2016 11:25 AM, Juan F. Sehuanes wrote:

I created a Fakefish module. So far it only has a pulse-fish and a
wave-fish. We might want to add more things to it (s.a. different
species like Eigenmania), but this should be fine for what we need it
now i.e. the TESTS!

please review and add suggestions!

---

    You can view, comment on, or merge this pull request online at:

#34

    Commit Summary

• fakefish.py created. Pulse-fish data now available with customizable
  parameters. Still need to work on wave-fish.

• almost done. Need to finish plot for pulsefish.

• fakefish.py ready for external review.

  File Changes
  

• A thunderfish/fakefish.py
  https://github.com/bendalab/thunderfish/pull/34/files#diff-0 (173)

  Patch Links:
  

• https://github.com/bendalab/thunderfish/pull/34.patch

• https://github.com/bendalab/thunderfish/pull/34.diff

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---

Prof. Dr. Jan Benda
Abteilung Neuroethologie
Institut fuer Neurobiologie
Universitaet Tuebingen
Auf der Morgenstelle 28 E phone: +49 / 7071 - 29 74573
72076 Tuebingen fax: +49 / 7071 - 29 5144

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[coveralls]

Coverage decreased (-0.2%) to 13.497% when pulling a7b55b1 on jfsehuanes:fakefish_data into a97365a on bendalab:master.

[coveralls]

Coverage decreased (-0.2%) to 13.55% when pulling c9775e6 on jfsehuanes:fakefish_data into a97365a on bendalab:master.