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HTTP Error 500: Internal Server Error #16

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mictadlo opened this issue Oct 27, 2015 · 0 comments
Open

HTTP Error 500: Internal Server Error #16

mictadlo opened this issue Oct 27, 2015 · 0 comments

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@mictadlo
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Hi,
I tried to build a docker container which includes ChemicalToolBox but I always get HTTP Error 500: Internal Server Error

toolshed

starting Galaxy
Galaxy is running.
Processing:\t --url https://toolshed.g2.bx.psu.edu/ -o bgruening --name chemicaltoolbox_merging_chemical_databases_workflow --panel-section-name ChemicalToolBox
HTTP Error 500: Internal Server Error
{"err_msg": "Error attempting to retrieve installation information from tool shed https://toolshed.g2.bx.psu.edu/ for revision fdabd3833502 of repository chemicaltoolbox_merging_chemical_databases_workflow owned by bgruening: HTTP Error 500: Internal Server Error", "err_code": 500001}
The command '/bin/sh -c install-repository "--url https://toolshed.g2.bx.psu.edu/ -o bgruening --name chemicaltoolbox_merging_chemical_databases_workflow --panel-section-name ChemicalToolBox"' returned a non-zero code: 1

testtoolshed

starting Galaxy
Galaxy is running.
Processing:\t --url http://testtoolshed.g2.bx.psu.edu/ -o bgruening --name chemicaltoolbox --panel-section-name ChemicalToolBox
HTTP Error 500: Internal Server Error
{"err_msg": "Error attempting to retrieve installation information from tool shed http://testtoolshed.g2.bx.psu.edu/ for revision 4133dbf7ff4d of repository chemicaltoolbox owned by bgruening: HTTP Error 500: Internal Server Error", "err_code": 500001}
The command '/bin/sh -c install-repository "--url http://testtoolshed.g2.bx.psu.edu/ -o bgruening --name chemicaltoolbox --panel-section-name ChemicalToolBox"' returned a non-zero code: 1

Do I have to increase in Dockerfile with sed the value for threadpool_kill_thread_limit in my config/galaxy.ini?

Thank you in advance.

Mic

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