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[ADAM-1053] Clean up Transform #1081

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fnothaft
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Resolves #1053. Split out into many commits for reviewer convenience, but also to make it easier to address merge conflicts when #1011 merges. Will squash before merge.

}
}

def apply(rdd: RDD[AlignmentRecord],
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this cleans up nice!

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Agreed. I was quite pleased at the end. I was inspired by @ryan-williams's maybeX pattern, which we've got elsewhere.

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Test PASSed.
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@heuermh heuermh modified the milestone: 0.20.0 Jul 18, 2016
@heuermh heuermh changed the title Clean up Transform [ADAM-1053] Clean up Transform Jul 18, 2016
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heuermh commented Jul 19, 2016

Will let you rebase and resolve conflicts, then I'll give a review pass.

@fnothaft fnothaft force-pushed the issues/1053-clean-up-transform branch from a0a515f to ae9c422 Compare July 19, 2016 16:26
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Rebased!

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heuermh commented Jul 19, 2016

LGTM

Squash then I'll merge.

Moves all if clauses into `maybeX` methods. Resolves bigdatagenomics#1053.
@fnothaft fnothaft force-pushed the issues/1053-clean-up-transform branch from ae9c422 to c251f79 Compare July 19, 2016 17:40
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Squashed!

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@heuermh heuermh merged commit c251f79 into bigdatagenomics:master Jul 19, 2016
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heuermh commented Jul 19, 2016

Merged commit c251f79.

Thank you, @fnothaft!

@fnothaft fnothaft deleted the issues/1053-clean-up-transform branch July 26, 2016 06:46
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3 participants