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fix named process pooling and renaming issues (#1904)
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samplesheets/tests/edit/i_small_assay_insert_pool_process.json
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Original file line number | Diff line number | Diff line change |
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{ | ||
"study": "11111111-1111-1111-1111-111111111111", | ||
"assay": "22222222-2222-2222-2222-222222222222", | ||
"nodes": [ | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": "11111111-1111-1111-5555-000000000000", | ||
"obj_cls": "GenericMaterial", | ||
"value": "0818-N1" | ||
} | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "library preparation", | ||
"uuid_ref": "22222222-2222-2222-bbbb-000000000000", | ||
"header_name": "Protocol", | ||
"header_type": "protocol", | ||
"header_field": "col10", | ||
"obj_cls": "Process" | ||
} | ||
], | ||
"headers": [ | ||
"Protocol REF" | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "0818-N1-DNA1", | ||
"unit": "", | ||
"header_name": "Name", | ||
"header_type": "name", | ||
"header_field": "col11", | ||
"obj_cls": "GenericMaterial", | ||
"item_type": "MATERIAL" | ||
} | ||
], | ||
"headers": [ | ||
"Library Name" | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": "22222222-2222-2222-2222-000000000003", | ||
"value": "nucleic acid sequencing", | ||
"obj_cls": "Process" | ||
} | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "0818-N1-DNA1-WES1-R1.fastq.qz", | ||
"unit": "", | ||
"header_name": "Name", | ||
"header_type": "name", | ||
"header_field": "col14", | ||
"obj_cls": "GenericMaterial", | ||
"item_type": "DATA" | ||
} | ||
], | ||
"headers": [ | ||
"Raw Data File" | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "0818-N1-DNA1-WES1-R2.fastq.qz", | ||
"unit": "", | ||
"header_name": "Name", | ||
"header_type": "name", | ||
"header_field": "col15", | ||
"obj_cls": "GenericMaterial", | ||
"item_type": "DATA" | ||
} | ||
], | ||
"headers": [ | ||
"Raw Data File" | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "somatic variant calling-2", | ||
"unit": "", | ||
"header_name": "Data Transformation Name", | ||
"header_type": "process_name", | ||
"header_field": "col16", | ||
"obj_cls": "Process" | ||
} | ||
], | ||
"headers": [ | ||
"Data Transformation Name" | ||
] | ||
}, | ||
{ | ||
"cells": [ | ||
{ | ||
"uuid": null, | ||
"value": "new-somatic.vcf.gz", | ||
"unit": "", | ||
"header_name": "Name", | ||
"header_type": "name", | ||
"header_field": "col17", | ||
"obj_cls": "GenericMaterial", | ||
"item_type": "DATA" | ||
} | ||
], | ||
"headers": [ | ||
"Derived Data File" | ||
] | ||
} | ||
] | ||
} |
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