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FastqCleaner Build Status AppVeyor Build Status R CRAN

A Shiny web-app to clean FASTQ files with R and Bioconductor

This is a development repository

Please install the application using the canonical way using Bioconductor

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("FastqCleaner")

Note: due to a change in Shiny, the Bioconductor version is working with Shiny <= 1.6. For the development version, please install using the following code:

install.packages("devtools")
devtools::install_github("https://github.com/leandroroser/FastqCleaner")
  • The development version will be pushed to Bioconductor after proper checks (note from the author, 2022-07-01)

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