discordant

R package for determining differential correlation of molecular feature pairs from -omics data using mixture models.

Information

Method paper published in Bioinformatics

Siska C, Bowler R, Kechris K. The discordant method: a novel approach for differential correlation [published correction appears in Bioinformatics. 2017 Jan 1;33(1):150]. Bioinformatics. 2016;32(5):690-696. doi:10.1093/bioinformatics/btv633

Software paper published in BMC Research Notes

Siska C, Kechris K. Differential correlation for sequencing data. BMC Res Notes. 2017;10(1):54. Published 2017 Jan 19. doi:10.1186/s13104-016-2331-9

Installation

Install via Bioconductor:

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")

BiocManager::install("discordant")

Install via Github:

if (!require("devtools")) install.packages("devtools")
devtools::install_github("siskac/discordant")

Bug Reports

Report bugs as issues on the GitHub repository new issue