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Workflow for adding updated refseq alignment data #236

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soensz01 opened this issue Nov 12, 2021 · 4 comments
Closed

Workflow for adding updated refseq alignment data #236

soensz01 opened this issue Nov 12, 2021 · 4 comments
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closed-by-stale stale Issue is stale and subject to automatic closing

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@soensz01
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I believe there have been similar questions and I'm uncertain if there was a clear recommendation about how one would go about adding new transcript data into uta for use with the hgvs module such as the data from here:
https://ftp.ncbi.nlm.nih.gov/genomes/all/annotation_releases/9606/105.20201022/

Will proper functionality require that changes to the transcript sequences as well as the alignment data be available within the seqrepo data as well?

Thanks for any advice
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This issue is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 7 days.

@github-actions github-actions bot added the stale Issue is stale and subject to automatic closing label Nov 28, 2023
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github-actions bot commented Dec 5, 2023

This issue was closed because it has been stalled for 7 days with no activity.

@github-actions github-actions bot closed this as not planned Won't fix, can't repro, duplicate, stale Dec 5, 2023
@reece reece removed stale Issue is stale and subject to automatic closing closed-by-stale labels Dec 8, 2023
@reece reece reopened this Dec 8, 2023
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github-actions bot commented Mar 8, 2024

This issue is stale because it has been open 90 days with no activity. Remove stale label or comment or this will be closed in 7 days.

@github-actions github-actions bot added the stale Issue is stale and subject to automatic closing label Mar 8, 2024
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This issue was closed because it has been stalled for 7 days with no activity.

@github-actions github-actions bot closed this as not planned Won't fix, can't repro, duplicate, stale Mar 15, 2024
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@reece @soensz01