Update mosdepth recipe

recipes/mosdepth/build.sh

@@ -9,10 +9,13 @@ if [[ ${target_platform}  == osx-64 ]] ; then
     curl -SL https://github.com/brentp/mosdepth/archive/refs/tags/v${PKG_VERSION}.tar.gz -o mosdepth-latest.tar.gz
     tar -xzf mosdepth-latest.tar.gz
     cd mosdepth-${PKG_VERSION}
-    nimble install -y "docopt@0.7.0"
-    nimble build -y --verbose -d:release
+    export CFLAGS="$CFLAGS -I$PREFIX/include"
+    export LDFLAGS="$LDFLAGS -L$PREFIX/lib"
+    nimble install -y "docopt@0.7.0"  --passC:"-I$PREFIX/include" --passL:"-L$PREFIX/lib"
+    nimble build -y --verbose -d:release -d:d4 --passC:"-I$PREFIX/include" --passL:"-L$PREFIX/lib"
 else
-    curl -SL https://github.com/brentp/mosdepth/releases/download/v$PKG_VERSION/mosdepth -o mosdepth
+    #Link to mosdepth_d4 is specified below because of https://github.com/brentp/mosdepth/issues/232 
+    curl -SL https://github.com/brentp/mosdepth/releases/download/v$PKG_VERSION/mosdepth_d4 -o mosdepth
     chmod +x mosdepth
 fi
 

recipes/mosdepth/meta.yaml

@@ -5,7 +5,7 @@ package:
   version: {{ version }}
 
 build:
-  number: 0
+  number: 1
   run_exports:
     - {{ pin_subpackage("mosdepth", max_pin="x.x") }}
 
@@ -15,6 +15,7 @@ requirements:
     - curl
   host:
     - htslib >=1.19.1
+    - d4binding
   run:
 
 test: