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songbird installation with qiime2-2020.2 problem #162

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princy149 opened this issue Apr 30, 2022 · 4 comments
Closed

songbird installation with qiime2-2020.2 problem #162

princy149 opened this issue Apr 30, 2022 · 4 comments

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@princy149
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princy149 commented Apr 30, 2022

hi

I am trying to install songbird, using installation instructions in tutorial, but everytime I found this error could you help me regarding this why it occurs ? and how can i solve installation of songbird using qiime2 interface?

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@mortonjt
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I can't comment on why this is the case - but it looks like you need an older version of python for some reason ...

Have you tried pip install songbird instead? We've noticed that the conda recipes have been difficult to maintain with tensorflow.

@princy149
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hi Mortonjt, Thank you so much for your reply and suggestion,
actually I tried as you suggest for pip for installation of songbird, and get successful to see the songbird plugin in qiime info but again when i tried to run the command it creates some errors, which is I am going to attached here.

please check this what should I do to solve this problem?
all version info is in info file...
info
problem-1
problem3

@mortonjt
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mortonjt commented May 2, 2022

ok - we've seen this error before. Take a look at the following issues #102 #120 -- you may have some issues with either your biom table, or sample name mismatches between your biom table and your metadata.

@princy149
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thank you once again Mortonjt, for your promt reply and solving my issues..

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