Issue using networklevel()

[kminach]

I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) :
object 'H2_max' not found".
I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE.
What can I do to resolve this issue?
Thank you in advance.

[cdormann]

Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks!

On 5. Jan 2021, at 13:09, kminach ***@***.***> wrote: I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#13>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

[kminach]

I use the latest update of bipartite on CRAN repository. I will install bipartite through github and I will inform you if the issue persists. Please consider to update CRAN, especially for helping new bipartite users like me: I spent much time to configure that the problem was not in my data, and I found by pure luck your github repository. Nonetheless, I am grateful for your work with bipartite, which is very helpful in pollination network analysis. Best regards, Kostas

________________________________________ Αιγινιτη 2, 38446 Βόλος Μαγνησία Ελλάδα 6977217044 2421085679 k.minachilis@aegean.gr Skype:kminachilis

________________________________ Από: cdormann <notifications@github.com> Eστάλη: Τρίτη, 5 Ιανουαρίου 2021, 14:14 Προς: biometry/bipartite Κοιν.: kminach; Author Θέμα: Re: [biometry/bipartite] Issue using networklevel() (#13) Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks!

On 5. Jan 2021, at 13:09, kminach ***@***.***> wrote: I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#13>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub<#13 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ASLPSD67T7XDRSNRRPSV233SYL7DJANCNFSM4VU7R2OA>.

[cdormann]

Hi Kostas, yes, will do: it's on my new year's resolution list ;-) Carsten

On 5. Jan 2021, at 13:45, kminach ***@***.***> wrote: I use the latest update of bipartite on CRAN repository. I will install bipartite through github and I will inform you if the issue persists. Please consider to update CRAN, especially for helping new bipartite users like me: I spent much time to configure that the problem was not in my data, and I found by pure luck your github repository. Nonetheless, I am grateful for your work with bipartite, which is very helpful in pollination network analysis. Best regards, Kostas ________________________________________ Αιγινιτη 2, 38446 Βόλος Μαγνησία Ελλάδα 6977217044 2421085679 ***@***.*** ***@***.***> Skype:kminachilis ________________________________ Από: cdormann ***@***.*** ***@***.***>> Eστάλη: Τρίτη, 5 Ιανουαρίου 2021, 14:14 Προς: biometry/bipartite Κοιν.: kminach; Author Θέμα: Re: [biometry/bipartite] Issue using networklevel() (#13) Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks! > On 5. Jan 2021, at 13:09, kminach ***@***.*** ***@***.***>> wrote: > > > I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : > object 'H2_max' not found". > I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. > What can I do to resolve this issue? > Thank you in advance. > > — > You are receiving this because you are subscribed to this thread. > Reply to this email directly, view it on GitHub <#13 <#13>>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA <https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA>>. > — — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: ***@***.*** ***@***.***> — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub<#13 (comment) <#13 (comment)>>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ASLPSD67T7XDRSNRRPSV233SYL7DJANCNFSM4VU7R2OA <https://github.com/notifications/unsubscribe-auth/ASLPSD67T7XDRSNRRPSV233SYL7DJANCNFSM4VU7R2OA>>. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#13 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIRO545XYB67MM32XU3SYMCVNANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

[kminach]

Hi Carsten,

As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly!

I am looking forward to see this version (2.16) in CRAN.

Thank you very much for your help.

Best whishes,

Kostas

[cdormann]

Hi Kostas, bipartite 2.16 is now on its way to CRAN, according to an email I received today. Give it another day and it should be there. Carsten

On 5. Jan 2021, at 18:29, kminach ***@***.***> wrote: Hi Carsten, As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly! I am looking forward to see this version (2.16) in CRAN. Thank you very much for your help. Best whishes, Kostas — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#13 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIRZFW3HWY5VFYWVOBTSYNEAXANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

[kminach]

Good morning Carsten, Thank you for being so kind to inform me. Best regards, Kostas From: cdormann <notifications@github.com> Sent: Monday, February 8, 2021 9:08 AM To: biometry/bipartite <bipartite@noreply.github.com> Cc: kminach <kminachilis@yahoo.com>; State change <state_change@noreply.github.com> Subject: Re: [biometry/bipartite] Issue using networklevel() (#13) Hi Kostas, bipartite 2.16 is now on its way to CRAN, according to an email I received today. Give it another day and it should be there. Carsten

On 5. Jan 2021, at 18:29, kminach ***@***.*** ***@***.***> > wrote: Hi Carsten, As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly! I am looking forward to see this version (2.16) in CRAN. Thank you very much for your help. Best whishes, Kostas — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#13 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIRZFW3HWY5VFYWVOBTSYNEAXANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de <mailto:carsten.dormann@biom.uni-freiburg.de> — You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub <#13 (comment)> , or unsubscribe <https://github.com/notifications/unsubscribe-auth/ASLPSDYMMYXL4V3R777BKRDS56ETVANCNFSM4VU7R2OA> . <https://github.com/notifications/beacon/ASLPSD432X36KDEJEIHOLRDS56ETVA5CNFSM4VU7R2OKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOFYYGRFY.gif>