virus-assembly

This repository contains the Biowdl workflow which assembles a virus using illumina reads.

Documentation

Documentation for this pipeline can be found here.

This workflow is part of Biowdl developed by the SASC team.

For any question related to virus-assembly, please use the github issue tracker or contact the SASC team directly at: sasc@lumc.nl.

Name		Name	Last commit message	Last commit date
Latest commit History 90 Commits
QC @ b937d61		QC @ b937d61
project		project
scripts @ 56ee741		scripts @ 56ee741
src/test/scala/biowdl/test/virusassembly		src/test/scala/biowdl/test/virusassembly
tasks @ b616508		tasks @ b616508
.gitignore		.gitignore
.gitmodules		.gitmodules
.travis.yml		.travis.yml
Jenkinsfile		Jenkinsfile
LICENSE		LICENSE
README.md		README.md
build.sbt		build.sbt
environment.yml		environment.yml
inputs.json		inputs.json
library.wdl		library.wdl
pipeline.wdl		pipeline.wdl
readgroup.wdl		readgroup.wdl
sample.wdl		sample.wdl
samples.example.yml		samples.example.yml
structs.wdl		structs.wdl