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Port slendr to SLiM 4.0 and update Python dependencies #104
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We got there and it didn't even take much time. slendr is now locked to SLiM 4.x, and drops the 3.7.1 support going forward. Similarly, the latest versions of msprime/tskit/pyslim are also required for tree sequence analysis and are automatically installed via slendr's I will update the manuscript soon, probably next week. I predict only 5-10 sentences will need to be changed, mostly installation instructions (CRAN instead of GitHub installation) and description of software dependencies. Basically all other changes to the R package have been internal and don't involve changes in user-facing functionality. I would like to submit the paper to PCI for review in the first 1-2 weeks of September. I will ping all three of you (@FerRacimo, @bhaller and @petrelharp) as soon as I made those updates to the paper. |
Codecov Report
@@ Coverage Diff @@
## main #104 +/- ##
==========================================
- Coverage 81.90% 81.71% -0.19%
==========================================
Files 6 6
Lines 2879 2888 +9
==========================================
+ Hits 2358 2360 +2
- Misses 521 528 +7
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