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Filter invalid SNPs error #5

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quattro opened this issue May 13, 2019 · 0 comments
Closed

Filter invalid SNPs error #5

quattro opened this issue May 13, 2019 · 0 comments
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quattro commented May 13, 2019 •
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There are some rare instances of SNPs that look like they could be a match between QC'd and munged GWAS and RefPanel, but result in an error. This prevents fine-mapping from occurring.
@quattro quattro added the bug label May 13, 2019
@quattro quattro self-assigned this May 13, 2019
quattro added a commit that referenced this issue May 22, 2019
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fixes issues #5 and #3
266ea8e
@quattro quattro closed this as completed May 23, 2019
quattro added a commit that referenced this issue Jun 24, 2019
@quattro
included additional checks when providing a BED location file. update…
1b54f6b 
…d to set chrom column to 'category'. fixes #5
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