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Switch GATK to the Apache 2.0 license #7079

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merged 6 commits into from Feb 19, 2021
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droazen
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@droazen droazen commented Feb 12, 2021

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droazen commented Feb 12, 2021

@lbergelson please review

@jonn-smith jonn-smith requested review from jonn-smith and removed request for lbergelson February 17, 2021 18:37
@jonn-smith jonn-smith assigned jonn-smith and unassigned lbergelson Feb 17, 2021
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Some comments and updates. I also went through and committed other updates to the license that I found in other files in this repo.

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droazen and others added 4 commits February 19, 2021 14:29
Co-authored-by: Jonn Smith <jonn-smith@users.noreply.github.com>
Co-authored-by: Jonn Smith <jonn-smith@users.noreply.github.com>
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I just did my own pass for any remaining License language that I could find that could cause problems with the new language. Besides bits that get pulled in by our build/dependencies I see a few python files with old license agreements CreateCosmicFusionGene.tsv, CreateCosmicGene.tsv, and GenericTsvReader.py. We should probably ask about whether those can be done away with. They look like old oncotator code perhaps?

@@ -8,15 +8,6 @@
import org.broadinstitute.hellbender.tools.walkers.varianteval.util.Analysis;
import org.broadinstitute.hellbender.tools.walkers.varianteval.util.DataPoint;

/**
* The Broad Institute
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I just did a check and these 3 files seem to be the last vestiges of old license code in the headers of any of our source files.

@droazen droazen dismissed jonn-smith’s stale review February 19, 2021 21:00

Comments addressed

@droazen droazen merged commit 1f7fade into master Feb 19, 2021
@droazen droazen deleted the dr_switch_to_apache_license branch February 19, 2021 21:01
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4 participants