Skip to content


  • Arctic Code Vault Contributor


@broadinstitute @samtools


  1. Official code repository for GATK versions 4 and up

    Java 892 363

  2. A Java API for high-throughput sequencing data (HTS) formats.

    Java 214 231

  3. GATK Native Bindings Repository

    Java 4 2

  4. Java library for parsing command line options

    Java 280 57

  5. Command line argument parser and online documentation generation utilities for java command line programs.

    Java 6 5

445 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2020

Created a pull request in samtools/htsjdk that received 3 comments

Add a getIDs method to VariantContext

This returns a List of IDs instead of a single String. Fixes #1506 @BoscoSuent this was quick so I added it, it should fix your issue.

+42 −7 3 comments

Seeing something unexpected? Take a look at the GitHub profile guide.

You can’t perform that action at this time.