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updating the dataflow sdk version #775

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merged 1 commit into from Jul 31, 2015

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lbergelson
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fixes #754

updating spark along side the dataflow jump
also updating other dependencies as well

changing GatkTestPipeline to downgrade a naming error to a warning
replacing calls to setName
replacing calls to setCoder with calls to withCoder when possible

hooking up the validation stringency for local files
fixes #745

disabling failing test and opening #774 to reenable it

  fixes #754

updating spark along side the dataflow jump
also updating other dependencies as well

changing GatkTestPipeline to downgrade a naming error to a warning
replacing calls to setName
replacing calls to setCoder with calls to withCoder when possible

hooking up the validation stringency for local files
  fixes #745

disabling failing test and opening #774 to reenable it
@davidadamsphd
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LGTM!

lbergelson added a commit that referenced this pull request Jul 31, 2015
…and_others

updating the dataflow sdk version
@lbergelson lbergelson merged commit 0e64078 into master Jul 31, 2015
@lbergelson lbergelson deleted the lb_updating_dataflow_sdk_and_others branch July 31, 2015 19:11
lbergelson added a commit that referenced this pull request Jul 31, 2015
…and_others

updating the dataflow sdk version
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