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Hi, I am trying to run wot on the simulated data provided with the tutorial. But i keep getting this error. Can you please help on why this error is occurring. I wanted to first run the commands on this dataset and apply it on our dataset.
wot trajectory --tmap tmaps --cell_set cell_sets.gmt --time 10 --out traj.txt
Traceback (most recent call last):
File "/home/brightann/.local/bin/wot", line 11, in
sys.exit(main())
File "/home/brightann/.local/lib/python3.7/site-packages/wot/main.py", line 23, in main
cmd.main(command_args)
File "/home/brightann/.local/lib/python3.7/site-packages/wot/commands/trajectory.py", line 23, in main
trajectory_ds = tmap_model.compute_trajectories(populations)
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/transport_map_model.py", line 71, in compute_trajectories
while self.can_pull_back(*populations):
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/transport_map_model.py", line 187, in can_pull_back
return self.timepoints.index(wot.tmap.unique_timepoint(*populations)) > 0
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/util.py", line 24, in unique_timepoint
raise ValueError("Empty population list")
ValueError: Empty population list
The text was updated successfully, but these errors were encountered:
Hi, I am trying to run wot on the simulated data provided with the tutorial. But i keep getting this error. Can you please help on why this error is occurring. I wanted to first run the commands on this dataset and apply it on our dataset.
wot trajectory --tmap tmaps --cell_set cell_sets.gmt --time 10 --out traj.txt
Traceback (most recent call last):
File "/home/brightann/.local/bin/wot", line 11, in
sys.exit(main())
File "/home/brightann/.local/lib/python3.7/site-packages/wot/main.py", line 23, in main
cmd.main(command_args)
File "/home/brightann/.local/lib/python3.7/site-packages/wot/commands/trajectory.py", line 23, in main
trajectory_ds = tmap_model.compute_trajectories(populations)
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/transport_map_model.py", line 71, in compute_trajectories
while self.can_pull_back(*populations):
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/transport_map_model.py", line 187, in can_pull_back
return self.timepoints.index(wot.tmap.unique_timepoint(*populations)) > 0
File "/home/brightann/.local/lib/python3.7/site-packages/wot/tmap/util.py", line 24, in unique_timepoint
raise ValueError("Empty population list")
ValueError: Empty population list
The text was updated successfully, but these errors were encountered: