This package can be used on its own for analysis and visualization of founder data, and is part of a (planned) collection of packages. See Foundr App Developer Guide for an overview of package(s) use and components.
- foundr: data analysis and visualization
- foundrShiny: interactive shiny app
- foundrHarmony: harmonize data from multiple sources (to be written)
- modulr: harmonize WGCNA module objects
There is a default app (inst/shinyApp/app.R)
and shiny code in the
foundr
package, which will be removed soon. See foundrShiny
for the revised shiny code. See the
foundrBase tree of foundr
for the revised foundr package (in testing phase).
The foundrHarmony repo is currently in two places. The foundr package has generic functions for harmonizing data. The FounderDietStudy repository has code for harmonizing specific datasets. This needs to be organized better. See
Specialized instances are being developed for particular studies. See code in
See data visualizations in web apps