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bap

Bead-based scATAC-seq data Processing

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This is an integrated python (>= 3.6) and R package that performs analysis and identification of barcode multiplets and processes data files for downstream analyses for droplet-based single-cell ATAC-seq data.

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See the bap wiki page for details and FAQs about bap.

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Bead-based single-cell atac processing

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  • Python 66.6%
  • R 33.4%