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.decontxInitializeZ passes seed for reproducibility #242

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merged 1 commit into from
Jan 13, 2020

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Irisapo
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@Irisapo Irisapo commented Jan 13, 2020

fix the problem where celdaUmap within the .decontxInitializeZ cannot be reproduced by passing seed through . decontxInitializeZ into recursiveSplitModule & celdaUmap

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R/decon.R:453:7: style: Opening curly braces should never go on their own line and should always be followed by a new line.

​      {
      ^

R/decon.R:486:58: style: Trailing whitespace is superfluous.

# seed passed to this function is to be furhter passed to 
                                                         ^

R/decon.R:880:1: style: Use spaces to indent, not tabs.

#sce <- scater::normalize(sce)
^~

R/decon.R:910:1: style: Use spaces to indent, not tabs.

​			with_seed(seed, initialModuleSplit <- recursiveSplitModule(countsFiltered,
^~~

zhewa added a commit that referenced this pull request Jan 13, 2020
@zhewa zhewa merged commit bf83c0c into campbio:master Jan 13, 2020
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3 participants