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- sc-bcr-shm-variant Public
- ont-basecalling-demultiplexing Public
Nextflow pipeline for basecalling / demultiplexing ONT data, using Dorado
- ncov2019-ont-nf Public
Nextflow pipeline to process SARS-CoV-2 genomes by Nanopore Sequencing using ARTIC (https://github.com/artic-network/fieldbioinformatics) tools
- review-long-covid-ml Public
Support repository for review "The role of machine learning in health policies during the COVID-19 pandemic and in long COVID management"
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- tandem-substitution-simulation Public
Simulation of false tandem substitutions from input sequencing data
