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Simon Fraser University
- British Columbia, Canada
Hybrid correction of PacBio long reads using a shortest path / one-end anchors approach. Developed at the SFU CompBio lab: https://github.com/sfu-compbio/colormap
Genome rearrangement distance in the Single Cut or Join, Tandem Duplications and Floating Duplications model
An open-source pipeline for benchmarking DNA long read correction algorithms for third generation sequencing technology
Reconstruction of ancestral genome maps
Fast Phylogentic Scaffolding of Ancient Contigs
See https://github.com/nluhmann/AGapEs for new versions.
in the last year
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