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  1. HCC-microbialDNA HCC-microbialDNA Public

    Microbial DNA as a Diagnostic Marker for Hepatocellular Carcinoma

    Jupyter Notebook 1

  2. human_host_filtration human_host_filtration Public

    Pipeline which removes human DNA from microbial shotgun samples.

    Shell 11 1

  3. comad comad Public

    Community Assembly Dynamics of Microbes

    Jupyter Notebook 1

  4. MostDetrimentalNodeFinder MostDetrimentalNodeFinder Public

    CSE 282 Final Project

    Python 1

  5. biocore/metagenomics_pooling_notebook biocore/metagenomics_pooling_notebook Public

    Jupyter notebooks to assist with sample processing

    Jupyter Notebook 8 16

  6. aryarm/VarBench aryarm/VarBench Public

    Benchmarking variant callers for long read data

    Python 1