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Programs for and by the whangee group, UCSF PUBS 2015

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Name		Name	Last commit message	Last commit date
Latest commit History 46 Commits
AA_vs_Residue.py		AA_vs_Residue.py
CH_intensity.py		CH_intensity.py
Current_Go		Current_Go
FORMATPhospho (STY)Sites.txt		FORMATPhospho (STY)Sites.txt
FORMATevidence.txt		FORMATevidence.txt
FORMATproteinGroups.txt		FORMATproteinGroups.txt
README.md		README.md
SGDID_to_go.pkl		SGDID_to_go.pkl
Tunicamycin_ub_proteinID_fold-change_rank.csv		Tunicamycin_ub_proteinID_fold-change_rank.csv
Tunicamycin_ubp_proteinID_fold-change_rank.csv		Tunicamycin_ubp_proteinID_fold-change_rank.csv
Tunicamycin_wcl_proteinID_fold-change_rank.csv		Tunicamycin_wcl_proteinID_fold-change_rank.csv
Tunicamycin_wclp_proteinID_fold-change_rank.csv		Tunicamycin_wclp_proteinID_fold-change_rank.csv
allele_dic.pkl		allele_dic.pkl
aminotonumber.pkl		aminotonumber.pkl
barcode_comparison.py		barcode_comparison.py
barcode_redundancy.py		barcode_redundancy.py
files needed for Dictionaries		files needed for Dictionaries
gene_association.sgd		gene_association.sgd
go_to_SGDID.pkl		go_to_SGDID.pkl
goterm_dict.pkl		goterm_dict.pkl
intensities.py		intensities.py
intensities_DA.py		intensities_DA.py
makeDicts.py		makeDicts.py
mass_spec_analysis.py		mass_spec_analysis.py
quality_control.py		quality_control.py
translate.pkl		translate.pkl
ub_tpk1_proteinID_fold-change_rank.csv		ub_tpk1_proteinID_fold-change_rank.csv
ubp_tpk1_proteinID_fold-change_rank.csv		ubp_tpk1_proteinID_fold-change_rank.csv
wcl_tpk1_proteinID_fold-change_rank.csv		wcl_tpk1_proteinID_fold-change_rank.csv
wclp_tpk1_proteinID_fold-change_rank.csv		wclp_tpk1_proteinID_fold-change_rank.csv