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Conditional effects #49

Merged
merged 26 commits into from
Sep 23, 2023
Merged

Conditional effects #49

merged 26 commits into from
Sep 23, 2023

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MaximilianPi
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  • bootstrapping
  • p-values for ACE and feature importance
  • some small bugs fixed by Armin

MaximilianPi and others added 26 commits July 11, 2023 18:56
@MaximilianPi
update: Cond effects
ee1ff0f
@ArminSchenk
restrict dopout rate to [0,1)
f7b556f
@ArminSchenk
Remove redundant code
1254e25
@ArminSchenk
Bugfix: The output layer now properly uses its assigned bias setting …
8240ec4 
…instead of using the setting of the last hidden layer
@ArminSchenk
Fix early stopping with validation set (issue #38)
63166c0
@ArminSchenk
remove redundant re-calculation of epoch losses for each batch
c6daa75
@ArminSchenk
Generalize training function to be usable for more different neural n…
2353179 
…etwork architectures
@MaximilianPi
Merge pull request #47 from citoverse/main
48eceb0 
Update branch
@MaximilianPi
Merge pull request #48 from ArminSchenk/overall
939c10b 
Overall
@MaximilianPi
ACE and some small bugs
648a0a6 
- Closes #45
- Closes #38
- Average conditional effects
@MaximilianPi
Bootstrap
5826ae7 
- Bootstrap
- Extend methods for bootstrapped model
@MaximilianPi
Bootstrap compability
c79baf1 
- ALE/PDP
- Small bug in gaussian likelihood
@MaximilianPi
Update dnn.R
bf3846f 
- progressbar for non parallelized bootstrap
@MaximilianPi
device and link
d1b95eb
@MaximilianPi
rename argument
352b06d
@MaximilianPi
Update dnn.R
99b43af
@MaximilianPi
regularization loss
94b597a 
- Baseline loss
- fixes #45
- fixes #32
- fixes #31
@MaximilianPi
Vignettes
f6aded5 
- bug in continue training, found by Armin
@MaximilianPi
Update vignettes
3d42587
@MaximilianPi
vignette
c6e5124
@MaximilianPi
README
a4ba445
@MaximilianPi
README and vignette
fbf64de
@MaximilianPi
vignettes and dnn baseline loss
b4c2d1c
@MaximilianPi
update vignettes
d8b81e0
@MaximilianPi
final changes
539a6d8
@MaximilianPi
README
f8dda27
@MaximilianPi MaximilianPi merged commit ad8ddc6 into main Sep 23, 2023
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2 participants
@MaximilianPi @ArminSchenk