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Add build pattern for bioconductor packages #678

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phmccarty opened this issue Oct 7, 2021 · 0 comments
Open

Add build pattern for bioconductor packages #678

phmccarty opened this issue Oct 7, 2021 · 0 comments
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enhancement Feature request for autospec

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@phmccarty
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Bioconductor packages are similar to our current CRAN packages, but they need different build steps.

Note that some CRAN packages in Clear (like R-NMF) cannot be updated to the latest release because those versions depend on bioconductor packages.
@phmccarty phmccarty added the enhancement Feature request for autospec label Oct 7, 2021
clrpackages pushed a commit to clearlinux-pkgs/R-NMF that referenced this issue Mar 1, 2022
@phmccarty
version bump from 0.21.0-39 to 0.21.0-40
39ba64a 
I forgot to add the autospec issue reference in my previous change.
The commit details are below, with reflink included this time :-P

    Revert to version 0.21.0

    As noted in an autospec feature request [0], the latest release of R-NMF
    requires a Bioconductor package, namely `Biobase`, and autospec does not
    support packaging of Biobase, or any other Bioconductor package, yet.

    Move back to the 0.21.0 release, since we can actually build it.

    [0]: clearlinux/autospec#678

Signed-off-by: Patrick McCarty <patrick.mccarty@intel.com>
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