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fix: Don't cast all types to string for CSV #498

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68 changes: 49 additions & 19 deletions csv/read.go
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ func (cl *Client) Read(r types.ReaderAtSeeker, table *schema.Table, res chan<- a
return reader.Err()
}
rec := reader.Record()
castRec, err := castFromString(rec, arrowSchema)
castRec, err := reverseTransformRecord(rec, arrowSchema)
if err != nil {
return fmt.Errorf("failed to cast extension types: %w", err)
}
Expand All @@ -33,27 +33,57 @@ func (cl *Client) Read(r types.ReaderAtSeeker, table *schema.Table, res chan<- a
return nil
}

// castFromString casts extension columns to string.
func castFromString(rec arrow.Record, arrowSchema *arrow.Schema) (arrow.Record, error) {
func reverseTransformRecord(rec arrow.Record, sc *arrow.Schema) (arrow.Record, error) {
if sc.Equal(rec.Schema()) {
return rec, nil
}

cols := make([]arrow.Array, rec.NumCols())
for c, f := range arrowSchema.Fields() {
col := rec.Column(c)
if isTypeSupported(f.Type) {
cols[c] = col
continue
var err error
for i, col := range rec.Columns() {
cols[i], err = reverseTransformArray(col, sc.Field(i).Type)
if err != nil {
return nil, err
}
}
return array.NewRecord(sc, cols, rec.NumRows()), nil
}

func reverseTransformArray(arr arrow.Array, dt arrow.DataType) (arrow.Array, error) {
if arrow.TypeEqual(arr.DataType(), dt) {
return arr, nil
}

sb := array.NewBuilder(memory.DefaultAllocator, f.Type)
for i := 0; i < col.Len(); i++ {
if col.IsNull(i) {
sb.AppendNull()
continue
}
if err := sb.AppendValueFromString(col.ValueStr(i)); err != nil {
return nil, fmt.Errorf("failed to AppendValueFromString col %v: %w", rec.ColumnName(c), err)
}
if str, ok := arr.(*array.String); ok {
return reverseTransformArrayFromString(str, dt)
}

// only lists left
listDT, listArr := dt.(arrow.ListLikeType), arr.(array.ListLike)
elems, err := reverseTransformArray(listArr.ListValues(), listDT.Elem())
if err != nil {
return nil, err
}
return array.MakeFromData(array.NewData(
listDT, listArr.Len(),
listArr.Data().Buffers(),
[]arrow.ArrayData{elems.Data()},
listArr.NullN(),
listArr.Data().Offset(),
)), nil
}

func reverseTransformArrayFromString(arr *array.String, dt arrow.DataType) (arrow.Array, error) {
builder := array.NewBuilder(memory.DefaultAllocator, dt)
builder.Reserve(arr.Len())
for i := 0; i < arr.Len(); i++ {
if arr.IsNull(i) {
builder.AppendNull()
continue
}
if err := builder.AppendValueFromString(arr.Value(i)); err != nil {
return nil, err
}
cols[c] = sb.NewArray()
}
return array.NewRecord(arrowSchema, cols, rec.NumRows()), nil
return builder.NewArray(), nil
}
4 changes: 2 additions & 2 deletions csv/testdata/TestWriteRead-default.csv

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4 changes: 2 additions & 2 deletions csv/testdata/TestWriteRead-with_delimiter.csv

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4 changes: 2 additions & 2 deletions csv/testdata/TestWriteRead-with_delimiter_headers.csv

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4 changes: 2 additions & 2 deletions csv/testdata/TestWriteRead-with_headers.csv

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110 changes: 77 additions & 33 deletions csv/write.go
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@ func (cl *Client) WriteHeader(w io.Writer, t *schema.Table) (types.Handle, error

func (h *Handle) WriteContent(records []arrow.Record) error {
for _, record := range records {
castRec := castToString(record)
castRec := transformRecord(record)
if err := h.w.Write(castRec); err != nil {
return fmt.Errorf("failed to write record to csv: %w", err)
}
Expand All @@ -57,59 +57,103 @@ func convertSchema(sch *arrow.Schema) *arrow.Schema {
fields := make([]arrow.Field, len(oldFields))
copy(fields, oldFields)
for i, f := range fields {
if !isTypeSupported(f.Type) {
fields[i].Type = arrow.BinaryTypes.String
}
fields[i].Metadata = stripCQExtensionMetadata(fields[i].Metadata)
fields[i].Type = convertType(f.Type)
fields[i].Metadata = stripCQExtensionMetadata(f.Metadata)
}

md := sch.Metadata()
newSchema := arrow.NewSchema(fields, &md)
return newSchema
}

func isTypeSupported(t arrow.DataType) bool {
// list from arrow/csv/common.go
switch t.(type) {
func convertType(dt arrow.DataType) arrow.DataType {
if typeSupported(dt) {
return dt
}
switch dt := dt.(type) {
case *arrow.MapType:
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maps aren't supported

case *arrow.FixedSizeListType:
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lists are converted as list(converted elem)

// not supported -> elem not supported
field := dt.ElemField()
field.Type = convertType(field.Type)
return arrow.FixedSizeListOfField(dt.Len(), field)
case arrow.ListLikeType:
// not supported -> elem not supported
field := dt.ElemField()
field.Type = convertType(field.Type)
return arrow.ListOfField(field)
}
return arrow.BinaryTypes.String
}

// typeSupported copied from arrow/csv/common.go
func typeSupported(dt arrow.DataType) bool {
switch dt := dt.(type) {
case *arrow.BooleanType:
case *arrow.Int8Type, *arrow.Int16Type, *arrow.Int32Type, *arrow.Int64Type:
case *arrow.Uint8Type, *arrow.Uint16Type, *arrow.Uint32Type, *arrow.Uint64Type:
case *arrow.Float32Type, *arrow.Float64Type:
case *arrow.StringType:
case *arrow.Float16Type, *arrow.Float32Type, *arrow.Float64Type:
case *arrow.StringType, *arrow.LargeStringType:
case *arrow.TimestampType:
case *arrow.Date32Type, *arrow.Date64Type:
case *arrow.Decimal128Type, *arrow.Decimal256Type:
case *arrow.ListType:
case *arrow.BinaryType:
case *arrow.MapType:
return false
case arrow.ListLikeType:
return typeSupported(dt.Elem())
case *arrow.BinaryType, *arrow.LargeBinaryType, *arrow.FixedSizeBinaryType:
case arrow.ExtensionType:
return true
case *arrow.NullType:
default:
return false
}

return false
return true
}

// castToString casts extension columns or unsupported columns to string. It does not release the original record.
func castToString(rec arrow.Record) arrow.Record {
newSchema := convertSchema(rec.Schema())
func transformRecord(rec arrow.Record) arrow.Record {
sc := convertSchema(rec.Schema())
if sc.Equal(rec.Schema()) {
return rec
}

cols := make([]arrow.Array, rec.NumCols())
for c := 0; c < int(rec.NumCols()); c++ {
col := rec.Column(c)
if isTypeSupported(col.DataType()) {
cols[c] = col
continue
}
for i, col := range rec.Columns() {
cols[i] = transformArray(col, sc.Field(i).Type)
}
return array.NewRecord(sc, cols, rec.NumRows())
}

sb := array.NewStringBuilder(memory.DefaultAllocator)
for i := 0; i < col.Len(); i++ {
if col.IsNull(i) {
sb.AppendNull()
continue
}
sb.Append(col.ValueStr(i))
func transformArray(arr arrow.Array, dt arrow.DataType) arrow.Array {
if arrow.TypeEqual(arr.DataType(), dt) {
return arr
}

if listDT, ok := dt.(arrow.ListLikeType); ok {
listArr := arr.(array.ListLike)
return array.MakeFromData(array.NewData(
listDT, listArr.Len(),
listArr.Data().Buffers(),
[]arrow.ArrayData{transformArray(listArr.ListValues(), listDT.Elem()).Data()},
listArr.NullN(),
// we use data offset for list like as the `ListValues` can be a larger array (happens when slicing)
listArr.Data().Offset(),
))
}

return transformArrayToString(arr)
}

func transformArrayToString(arr arrow.Array) *array.String {
builder := array.NewStringBuilder(memory.DefaultAllocator)
builder.Reserve(arr.Len())
for i := 0; i < arr.Len(); i++ {
if arr.IsNull(i) {
builder.AppendNull()
continue
}
cols[c] = sb.NewArray()
builder.Append(arr.ValueStr(i))
}
return array.NewRecord(newSchema, cols, rec.NumRows())
return builder.NewStringArray()
}

func stripCQExtensionMetadata(md arrow.Metadata) arrow.Metadata {
Expand Down