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@compmetagen

Computational Metagenomics

Computational Metagenomics Group at Fondazione Edmund Mach

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  1. strainest strainest Public

    StrainEst - abundance estimation of strains

    C++ 21 6

  2. micca micca Public

    micca - MICrobial Community Analysis

    Python 20 9

  3. rstudio-micca rstudio-micca Public

    RStudio - micca

    Dockerfile 1

  4. barelli_et_al_msystems_2020 barelli_et_al_msystems_2020 Public

    Machine Learning scripts and data for Barelli et al. "The gut microbiota communities of wild arboreal and ground-feeding tropical primates are affected differently by habitat disturbance"

    Python 1

  5. phylorelief-paper phylorelief-paper Public

    Scripts and data for "Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting"

    Python

  6. phylorelief phylorelief Public

    Python

Repositories

Showing 10 of 11 repositories
  • barelli_et_al_scirep_2021 Public

    Scripts and data for Barelli et al. "Interactions between parasitic helminths and gut microbiota in wild tropical primates from intact and fragmented habitats"

    compmetagen/barelli_et_al_scirep_2021’s past year of commit activity
    0 0 0 0 Updated Sep 8, 2021
  • compmetagen/AIforEarth2020’s past year of commit activity
    Shell 0 0 0 0 Updated Jun 19, 2020
  • compmetagen/docker-rdpclassifier’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Apr 15, 2020
  • barelli_et_al_msystems_2020 Public

    Machine Learning scripts and data for Barelli et al. "The gut microbiota communities of wild arboreal and ground-feeding tropical primates are affected differently by habitat disturbance"

    compmetagen/barelli_et_al_msystems_2020’s past year of commit activity
    Python 1 0 0 0 Updated Mar 23, 2020
  • micca Public

    micca - MICrobial Community Analysis

    compmetagen/micca’s past year of commit activity
    Python 20 GPL-3.0 9 6 0 Updated Feb 12, 2020
  • strainest Public

    StrainEst - abundance estimation of strains

    compmetagen/strainest’s past year of commit activity
    C++ 21 GPL-3.0 6 3 0 Updated Jan 17, 2020
  • rstudio-micca Public

    RStudio - micca

    compmetagen/rstudio-micca’s past year of commit activity
    Dockerfile 1 0 0 0 Updated Sep 3, 2019
  • taxies Public
    compmetagen/taxies’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Dec 10, 2018
  • compmetagen/docker-rstudio’s past year of commit activity
    0 0 0 0 Updated Apr 11, 2016
  • compmetagen/phylorelief’s past year of commit activity
    Python 0 GPL-3.0 0 2 0 Updated Feb 27, 2015

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