JOSS Review: Errors with pytest

[ayush9pandey]

I installed the software and ran pytest. I get the following two errors:

self = <test_timecourse.TestTimeCourse testMethod=test_general_run>

    def test_general_run(self):
        dm = basico.load_example('bruss')
        plots = []
>       basico.run_task(basico.T.TIME_COURSE, model=dm, plots=plots)
E       AttributeError: module 'basico' has no attribute 'run_task'

tests/test_timecourse.py:49: AttributeError
____________________________________________________________ TestTimeCourse.test_general_run_sedml ____________________________________________________________

self = <test_timecourse.TestTimeCourse testMethod=test_general_run_sedml>

    def test_general_run_sedml(self):
        dm = basico.load_model(os.path.join(THIS_DIR, 'sedml.xml'))
        plots = []
>       basico.run_scheduled_tasks(include_plots=False, include_general_plots=True, plots=plots, model=dm)
E       AttributeError: module 'basico' has no attribute 'run_scheduled_tasks'. Did you mean: 'get_scheduled_tasks'?

tests/test_timecourse.py:56: AttributeError

[fbergmann]

I usually run these tests using:

python -m pytest

from the root directory. This includes the 'basico' directory from it. I suppose I could try and append .. to the sys.path variable in case the imports don't succeed.

[ayush9pandey]

python -m pytest works! I'm fine with however you'd like to keep it, so we can close this issue :)

[fbergmann]

I've decided to leave thins as they are, and just added some explanation on how to run the tests to the documentation.