Skip to content

Commit

Permalink
Updated lineage constellations
Browse files Browse the repository at this point in the history
  • Loading branch information
@chrisruis
chrisruis committed Dec 3, 2021
1 parent 0d12160 commit 01192fe
Show file tree
Hide file tree
Showing 142 changed files with 426 additions and 142 deletions.
4 changes: 3 additions & 1 deletion lineage_constellations/AY.100_constellation.json
View file
Expand Up @@ -40,7 +40,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "27",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.101_constellation.json
View file
Expand Up @@ -41,7 +41,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "29",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.104_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "27",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.105_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.107_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.108_constellation.json
View file
Expand Up @@ -41,7 +41,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "29",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.109_constellation.json
View file
Expand Up @@ -41,7 +41,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "29",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.10_constellation.json
View file
Expand Up @@ -43,7 +43,9 @@
"orf8:D119N",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "30",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.110_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.111_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.112_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"n:G215C",
"n:D377Y",
"nuc:G29422T",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.113_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.114_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.115_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "23",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.116.1_constellation.json
View file
Expand Up @@ -40,7 +40,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "28",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.116_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.117_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.118_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.119_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.11_constellation.json
View file
Expand Up @@ -36,7 +36,9 @@
"n:R203M",
"n:D377Y",
"nuc:C29509T",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "23",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.120.1_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "27",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.120.2.1_constellation.json
View file
Expand Up @@ -43,7 +43,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "31",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.120.2_constellation.json
View file
Expand Up @@ -40,7 +40,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "28",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.120_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.13_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"orf7a:T120I",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.14_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"orf7a:T120I",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.15_constellation.json
View file
Expand Up @@ -40,7 +40,9 @@
"orf7a:T120I",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "27",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.16.1_constellation.json
View file
Expand Up @@ -45,7 +45,9 @@
"nuc:A28271T",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "32",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.16_constellation.json
View file
Expand Up @@ -39,7 +39,9 @@
"orf7a:T120I",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.17_constellation.json
View file
Expand Up @@ -42,7 +42,9 @@
"nuc:T28271A",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "29",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.18_constellation.json
View file
Expand Up @@ -40,7 +40,9 @@
"nuc:C27807T",
"n:R203M",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "27",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.1_constellation.json
View file
Expand Up @@ -37,7 +37,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "25",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.20_constellation.json
View file
Expand Up @@ -38,7 +38,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "26",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.21_constellation.json
View file
Expand Up @@ -42,7 +42,9 @@
"nuc:C29167T",
"nuc:G29227T",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "30",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.22_constellation.json
View file
Expand Up @@ -42,7 +42,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "30",
Expand Down
4 changes: 3 additions & 1 deletion lineage_constellations/AY.23.1_constellation.json
View file
Expand Up @@ -46,7 +46,9 @@
"n:R203M",
"n:G215C",
"n:D377Y",
"nuc:G29742T"
"nuc:G29742T",
"nuc:T8782C",
"orf8:L84S"
],
"rules": {
"min_alt": "33",
Expand Down

0 comments on commit 01192fe

Please sign in to comment.