19-isolate_pangenome_BMC_Biology_2020
: Reference genomes, gene and TE annotation files for Badet et al. BMC Biology 2021. DOI: https://doi.org/10.1186/s12915-020-0744-3
Structural_variation_scripts_Badet_2020
: Scripts used for analyses presented in the manuscript Badet et al. bioRxiv 2020. DOI: https://doi.org/10.1101/2020.10.23.352468
Cryphonectria_Stauber_2021
: Scripts and genetic data used for demographic modelling in Stauber et al. eLife 2021. DOI: https://doi.org/10.7554/eLife.56279
European_Z. tritici_genomes_2023
European Zymoseptoria tritici genomes sequenced in 2023 by Thomas Badet, Daniel Croll (UNINE) and Gabriel Scalliet (Syngenta) with PacBio Sequel II. Includes reference genomes, gene and TE annotation files.
Please contact us if you have any question (daniel.croll@unine.ch).