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base quality filtering is actually just masking during variant call but doesnt' remove bases #14

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andreas-wilm opened this issue Apr 16, 2015 · 0 comments

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andreas-wilm commented Apr 16, 2015

Raised by gmy on sourceforge's lofreq:discussion mailing list.

Either really implement this as filter (i.e. also remove in DP[4] and DP) or make clear it's just temporary masking (or have both)

andreas-wilm added the bug label

andreas-wilm self-assigned this

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