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  1. detettore6110 detettore6110 Public

    Detect insertion sequence polymorphisms in bacterial genomes

    Jupyter Notebook

  2. PacbioSnake PacbioSnake Public

    Python

  3. popgen popgen Public

    Methods used in Stritt et al. 2021: "Migration without interbreeding: evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes", Molecular Ecology

    Python 1

  4. tes tes Public

    Methods used in Stritt et al. 2019, "Diversity, dynamics and effects of long terminal repeat retrotransposons in the model grass Brachypodium distachyon", New Phytologist

    Jupyter Notebook 1

  5. slim_simulations slim_simulations Public

    A model to simulate the clonal dynamics of within-host grow of a bacterial pathogen

    Slim

  6. detettore detettore Public

    A program to detect transposable element polymorphisms

    Python 8 1